{{Short description|Family of bacteria}} {{Automatic taxobox | taxon = Alicyclobacillaceae | authority = da Costa & Rainey, 2009<ref name="dacosta">{{cite book |last1=da Costa |first1=M. S. |last2=Rainey |first2=F. A. |title=Family II. Alicyclobacillaceae fam. nov. Bergey's Manual of Systematic Bacteriology |date=2009 |volume=3 |page=229 |edition=2nd}}</ref> | subdivision_ranks = Genera | subdivision = * ''[[Alicyclobacillus]]'' * ''[[Collibacillus]]'' * ''[[Effusibacillus]]'' * ''[[Ferroacidibacillus]]'' * "''[[Fodinisporobacter]]''" * ''[[Kyrpidia]]'' * ''[[Sulfoacidibacillus]]'' * ''[[Tumebacillus]]'' }}
The '''Alicyclobacillaceae''' are a [[family (taxonomy)|family]] of [[Gram-positive]] [[bacteria]]. All members of this family are aerobic and form [[endospores]].<ref name="watanabe">{{cite journal |last1=Watanabe |first1=M. |last2=Kojima |first2=H. |last3=Fukui |first3=M. |title=Proposal of Effusibacillus lacus gen. nov., sp. nov., and reclassification of Alicyclobacillus pohliae as Effusibacillus pohliae comb. nov. and Alicyclobacillus consociatus as Effusibacillus consociatus comb. nov. |journal=International Journal of Systematic and Evolutionary Microbiology |date=23 May 2014 |volume=64 |issue=Pt 8 |pages=2770–2774 |doi=10.1099/ijs.0.055814-0|doi-access=free }}</ref>
The family contains four genera: ''[[Alicyclobacillus]]'', ''[[Effusibacillus]]'', ''[[Kyrpidia]]'', and ''[[Tumebacillus]]''.<ref name="watanabe"/> When originally created in 2009, Alicyclobacillaceae was a [[monophyly|monophyletic]] family, only including genus ''Alicyclobacillus''. In 2011, the novel genus ''[[Kyrpidia]]'' was proposed and placed in family Alicyclobacillaceae, and ''[[Tumebacillus]]'' was placed into the family as well.<ref>{{cite journal |last1=Klenk |first1=Hans-Peter |last2=Lapidus |first2=Alla |last3=Chertkov |first3=Olga |last4=Copeland |first4=Alex |last5=Del Rio |first5=Tijana Glavina |last6=Nolan |first6=Matt |last7=Lucas |first7=Susan |last8=Chen |first8=Feng |last9=Tice |first9=Hope |last10=Cheng |first10=Jan-Fang |last11=Han |first11=Cliff |last12=Bruce |first12=David |last13=Goodwin |first13=Lynne |last14=Pitluck |first14=Sam |last15=Pati |first15=Amrita |last16=Ivanova |first16=Natalia |last17=Mavromatis |first17=Konstantinos |last18=Daum |first18=Chris |last19=Chen |first19=Amy |last20=Palaniappan |first20=Krishna |last21=Chang |first21=Yun-juan |last22=Land |first22=Miriam |last23=Hauser |first23=Loren |last24=Jeffries |first24=Cynthia D. |last25=Detter |first25=John C. |last26=Rohde |first26=Manfred |last27=Abt |first27=Birte |last28=Pukall |first28=Rüdiger |last29=Göker |first29=Markus |last30=Bristow |first30=James |last31=Markowitz |first31=Victor |last32=Hugenholtz |first32=Philip |last33=Eisen |first33=Jonathan A. |title=Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and Rainey, 2010. |journal=Standards in Genomic Sciences |date=23 September 2011 |volume=5 |issue=1 |pages=121–134 | pmc=3236038|doi=10.4056/sigs.2144922|doi-access=free }}</ref> In 2014, the novel genus ''[[Effusibacillus]]'' was proposed and added as the fourth member of Alicyclobacillaceae.<ref name="watanabe"/>
''Alicyclobacillus'' is the largest genus in Alicyclobacillaceae, with over 20 validly published species. The species are all acidophilic and have thermally resistant endospores. Many species are common soil organisms. Certain ''Alicyclobacillus'' species (especially ''[[Alicyclobacillus acidoterrestris|A. acidoterrestris]]'') have been implicated in spoilage of pasteurized fruit juice.<ref>{{cite journal |last1=Pornpukdeewattana |first1=Soisuda |last2=Jindaprasert |first2=Aphacha |last3=Massa |first3=Salvatore |title=Alicyclobacillus spoilage and control - a review |journal=Critical Reviews in Food Science and Nutrition |date=7 February 2019 |volume=60 |issue=1 |pages=108–122 |doi=10.1080/10408398.2018.1516190}}</ref>
''Effusibacillus'' contains three species (as of 2019). Members of this genus have been isolated from a lake in Japan, a lake in Antarctica, and from the blood of a woman. ''E. lacus'' and ''E. pohliae'' are both thermophiles, with optimum growth temperatures above 50 °C, while the optimum growth temperature for ''E. consociatus'' is 30 °C.<ref name="watanabe"/><ref>{{cite journal |last1=Imperio |first1=T. |last2=Viti |first2=C. |last3=Marri |first3=L. |title=Alicyclobacillus pohliae sp. nov., a thermophilic, endospore-forming bacterium isolated from geothermal soil of the north-west slope of Mount Melbourne (Antarctica) |journal=International Journal of Systematic and Evolutionary Microbiology |date=1 January 2008 |volume=58 |issue=1 |pages=221–225 |doi=10.1099/ijs.0.65092-0|doi-access=free }}</ref><ref name="glaeser"/>
''Kyrpidia'' contains two species (as of 2019). Both species of ''Kyrpidia'' have been isolated from areas of high volcanic activity in [[Tuscany]], [[Italy]], and the [[Azores]]. The optimum temperature for growth for both members of the genus is approximately 55 °C.<ref>{{cite journal |last1=Reiner |first1=Johannes Eberhard |last2=Lapp |first2=Christian Jonas |last3=Bunk |first3=Boyke |last4=Spröer |first4=Cathrin |last5=Overmann |first5=Jörg |last6=Gescher |first6=Johannes |title=Complete Genome Sequence of Kyrpidia sp. Strain EA-1, a Thermophilic Knallgas Bacterium, Isolated from the Azores |journal=Genome Announcements |date=18 January 2018 |volume=6 |issue=3 |doi=10.1128/genomeA.01505-17|doi-access=free |pmc=5773743 }}</ref><ref>{{cite journal |last1=Reiner |first1=Johannes Eberhard |last2=Jung |first2=Tobias |last3=Lapp |first3=Christian Jonas |last4=Siedler |first4=Marvin |last5=Bunk |first5=Boyke |last6=Overmann |first6=Jörg |last7=Gescher |first7=Johannes |title=Kyrpidia spormannii sp. nov., a thermophilic, hydrogen-oxidizing, facultative autotroph, isolated from hydrothermal systems at São Miguel Island, and emended description of the genus Kyrpidia |journal=International Journal of Systematic and Evolutionary Microbiology |date=1 December 2018 |volume=68 |issue=12 |pages=3735–3740 |doi=10.1099/ijsem.0.003037|doi-access=free }}</ref>
''[[Tumebacillus]]'' contains 8 species. Members of this genus have been isolated from arctic permafrost, soil samples, cassava wastewater, decomposing algal scum, river water, and the gut of a vulture.<ref name="sung">{{cite journal |last1=Sung |first1=Hojun |last2=Kim |first2=Hyun Sik |last3=Lee |first3=June-Young |last4=Kang |first4=Woorim |last5=Kim |first5=Pil Soo |last6=Hyun |first6=Dong-Wook |last7=Tak |first7=Euon Jung |last8=Jung |first8=Mi-Ja |last9=Yun |first9=Ji-Hyun |last10=Kim |first10=Min-Soo |last11=Shin |first11=Na-Ri |last12=Whon |first12=Tae Woong |last13=Rho |first13=Jeong Rae |last14=Park |first14=Sun Duk |last15=Shim |first15=Hyung Eun |last16=Bae |first16=Jin-Woo |title=Tumebacillus avium sp. nov., isolated from the gut of a cinereous vulture, Aegypius monachus |journal=International Journal of Systematic and Evolutionary Microbiology |date=1 May 2018 |volume=68 |issue=5 |pages=1659–1664 |doi=10.1099/ijsem.0.002725|doi-access=free }}</ref> ''Tumebacillus'' was found during surveys of nasal airways of infants, an underground subway in Norway, and a mountain observatory in [[Austria]].<ref name="Nasal Airway Microbiota Profile and">{{cite journal |last1=Hasegawa |first1=Kohei |last2=Linnemann |first2=Rachel W. |last3=Mansbach |first3=Jonathan M. |last4=Ajami |first4=Nadim J. |last5=Espinola |first5=Janice A. |last6=Petrosino |first6=Joseph F. |last7=Piedra |first7=Pedro A. |last8=Stevenson |first8=Michelle D. |last9=Sullivan |first9=Ashley F. |last10=Thompson |first10=Amy D. |last11=Camargo |first11=Carlos A. |title=Nasal Airway Microbiota Profile and Severe Bronchiolitis in Infants |journal=The Pediatric Infectious Disease Journal |date=November 2017 |volume=36 |issue=11 |pages=1044–1051 |doi=10.1097/INF.0000000000001500|pmc=5479744 }}</ref><ref>{{cite journal |last1=Dybwad |first1=Marius |last2=Granum |first2=Per Einar |last3=Bruheim |first3=Per |last4=Blatny |first4=Janet Martha |title=Characterization of Airborne Bacteria at an Underground Subway Station |journal=Applied and Environmental Microbiology |date=15 March 2012 |volume=78 |issue=6 |pages=1917–1929 |doi=10.1128/AEM.07212-11 |pmc=3298144|doi-access=free }}</ref><ref>{{cite journal |last1=Els |first1=Nora |last2=Larose |first2=Catherine |last3=Baumann-Stanzer |first3=Kathrin |last4=Tignat-Perrier |first4=Romie |last5=Keuschnig |first5=Christoph |last6=Vogel |first6=Timothy M. |last7=Sattler |first7=Birgit |title=Microbial composition in seasonal time series of free tropospheric air and precipitation reveals community separation |journal=Aerobiologia |date=4 September 2019 |volume=35 |issue=4 |pages=671–701 |doi=10.1007/s10453-019-09606-x|doi-access=free }}</ref>
No member of Alicyclobacillaceae has been found to be infectious. ''[[Effusibacillus consociatus]]'' was isolated from human blood and ''Tumebacillus'' was found during a survey of nasal airways of infants, but in neither instance were the bacteria found to be the cause of infection.<ref name="Nasal Airway Microbiota Profile and"/><ref name="glaeser">{{cite journal |last1=Glaeser |first1=S. P. |last2=Falsen |first2=E. |last3=Martin |first3=K. |last4=Kampfer |first4=P. |title=Alicyclobacillus consociatus sp. nov., isolated from a human clinical specimen |journal=International Journal of Systematic and Evolutionary Microbiology |date=19 April 2013 |volume=63 |issue=Pt 10 |pages=3623–3627 |doi=10.1099/ijs.0.048173-0}}</ref>
==Phylogeny== The currently accepted taxonomy is based on the [[List of Prokaryotic names with Standing in Nomenclature]] (LPSN)<ref name=LPSN>{{cite web |author=A.C. Parte |url=https://lpsn.dsmz.de/family/Alicyclobacillaceae |title=Alicyclobacillaceae |access-date=2022-09-09 |publisher=[[List of Prokaryotic names with Standing in Nomenclature]] (LPSN) |display-authors=et al.}}</ref> and [[National Center for Biotechnology Information]] (NCBI)<ref name=NCBI>{{cite web |author=Sayers |url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=186823&lvl=3&lin=f&keep=1&srchmode=1&unlock |title=Alicyclobacillaceae |access-date=2022-09-09 |publisher=[[National Center for Biotechnology Information]] (NCBI) taxonomy database |display-authors=et al.}}</ref>
{| class="wikitable" |- ! colspan=1 | 16S rRNA based [[The All-Species Living Tree Project|LTP]]_10_2024<ref>{{cite web |title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 December 2024}}</ref><ref>{{cite web |title=LTP_all tree in newick format |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree |access-date=10 December 2024}}</ref><ref>{{cite web |title=LTP_10_2024 Release Notes |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf |access-date=10 December 2024}}</ref> ! colspan=1 | 120 marker proteins based [[Genome Taxonomy Database|GTDB]] 09-RS220<ref name="about">{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=[[Genome Taxonomy Database]] |access-date=10 May 2024}}</ref><ref name="tree">{{cite web |title=bac120_r220.sp_labels |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree |website=[[Genome Taxonomy Database]] |access-date=10 May 2024}}</ref><ref name="taxon_history">{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=[[Genome Taxonomy Database]] |access-date=10 May 2024}}</ref> |- | style="vertical-align:top| {{Clade | style=font-size:90%;line-height:80% |label1=Alicyclobacillaceae |1={{clade |1={{clade |1=''[[Effusibacillus]]'' <small>Watanabe, Kojima & Fukui 2014</small> |2={{clade |1=''[[Collibacillus]]'' <small>Jojima et al. 2023</small> |2=''[[Tumebacillus]]'' <small>Steven et al. 2008</small> }} }} |2={{clade |1=''[[Kyrpidia]]'' <small>Klenk et al. 2012</small> |2={{clade |1={{clade |1=''[[Ferroacidibacillus]]'' <small>Johnson et al. 2023</small> |2=''[[Sulfoacidibacillus]]'' <small>Johnson et al. 2023</small> }} |2=''[[Alicyclobacillus]]'' <small>Wisotzkey et al. 1992</small> }} }} }} }} | {{Clade | style=font-size:90%;line-height:80% |1={{clade |1={{clade |label1=Kyrpidiales |1={{clade |label1=Kyrpidiaceae |1=''[[Kyrpidia]]'' }} }} |2={{clade |label1=Tumebacillales |1={{clade |1={{clade |label1=BOQE01 |1=''[[Collibacillus]]'' |label2=Effusibacillaceae |2=''[[Effusibacillus]]'' }} |2={{clade |label1=Tumebacillaceae |1=''[[Tumebacillus]]'' }} }} |label2=Alicyclobacillales |2={{clade |label1=Sulfoacidibacillaceae |1={{clade |1=''[[Ferroacidibacillus]]'' |2=''[[Sulfoacidibacillus]]'' }} |label2=Alicyclobacillaceae |2=''[[Alicyclobacillus]]'' }} }} }} }} |}
==See also== * [[List of bacterial orders]] * [[List of bacteria genera]]
== References == {{Reflist}}
{{Bacteria classification|state=collapsed}} {{Taxonbar|from=Q2516824}}
[[Category:Bacillales]] [[Category:Bacteria families]]